BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G11SP1|AL426423
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1192 0.0
>3x_Contig1592
Length = 12307
Score = 1192 bits (584), Expect = 0.0
Identities = 730/797 (91%), Gaps = 5/797 (0%)
Strand = Plus / Minus
Query: 1 tcgcaccagcgaaggaacctggtaagtcaaatgcgttgaataamacgttccaagcgaagg 60
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 9292 tcgcaccagcgaaggaacctggtaagtaaaatgcgttgaataaaacgttccaagcgaagg 9233
Query: 61 attccttcaaaccaacttgttcgtcagagtcatttgttaammggttcttaatgatcaaag 120
|||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 9232 attccttcaaaccaacttgttcgtcagagtcatt-gttaaaaggttcttaa-gatcaaag 9175
Query: 121 aagagtaaatmccgaatgcmtatgaggmamagttgtmaaggmaccmma-tgatggagatg 179
|||||||||| || |||| ||||||| | |||||| |||| | | || ||||||||
Sbjct: 9174 aagagtaaatacccaatgaatatgaggaaaagttgtaaaggcaaaaaaatgctggagatg 9115
Query: 180 ataatsgtacggmaccmataammtttgamgatcaacccgtaaggcatcatcttgttaaat 239
||||| ||||| | | | | ||| |||||||||||||||||||||||||||||||
Sbjct: 9114 ataatggtacgcaaaaaaggagatgtgaagatcaacccgtaaggcatcatcttgttaaat 9055
Query: 240 ttggtggaagtgaaactcttgttttcc-ttgamttttmatctcatcaagaacaatgagaa 298
||| || |||||||||||||||||||| |||| |||| ||||||||||||||||||||||
Sbjct: 9054 ttgctgcaagtgaaactcttgttttcccttgaattttaatctcatcaagaacaatgagaa 8995
Query: 299 tggtggaatcgcacccmgtcccatggttaatctccaaacccattgtmatctgtgttcacc 358
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8994 tggtggaatcgcacccagtcccatggttaatctccaaacccattgtaatctgtgttcacc 8935
Query: 359 aaagatacaaatmagamccaatggcacaacggctgcgataacgamaccccmatcmatcat 418
|||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||| |||||
Sbjct: 8934 aaagatacaaataagaaccaatggcacaacggctgcgataacgaaaccccaatcaatcat 8875
Query: 419 gamgtttgtgaaccamacaaaccaacggttcctcctctttgcgggccatamagctgaagc 478
|| |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 8874 gaagtttgtgaaccaaacaaaccaacggttcctcctctttgcgggcaataaagctgaagc 8815
Query: 479 ttctgccgcagcagtagacccagcmggatattcagntccgnnnccgncncctnnmamgaa 538
|||||| ||||||||||||||||| |||||||||| |||| ||| | ||| | |||
Sbjct: 8814 ttctgcagcagcagtagacccagcaggatattcagatccgataccgacacctaaaaagaa 8755
Query: 539 nctatmagccgtgatagctgccaatmtaccaccagcttgagtcgttgtggtgccgacacc 598
|||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 8754 tctataagcagtgatagctgcaaatataccaccagcttgagtcgttgtggtgccgacacc 8695
Query: 599 ccaggcaccagcagcaaggatggaaaacacaatcaagatgatgttacccatcaacattgc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8694 ccaggcaccagcagcaaggatggaaaacacaatcaagatgatgttacccatcaacattgc 8635
Query: 659 caatctacgagaatagtagtcagcaatgtaaccgaagaacaaattgtcctaaaacgatac 718
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 8634 caatctacgagaatagtagtcagcaatgtaaccgaaggac-aattgtcctaaaacgatac 8576
Query: 719 caacaaaagcaatagatgaaacgttttgaatggcattcgaattcgagtactgatcaccat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8575 caacaaaagcaatagatgaaacgttttgaatggcattcgaattcgagtactgatcaccat 8516
Query: 779 aaatctgcgctaaacat 795
|||||||||||||||||
Sbjct: 8515 aaatctgcgctaaacat 8499
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.717 1.34
Gapped
Lambda K H
1.41 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3785
Number of Sequences: 1807
Number of extensions: 3785
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.5 bits)